| Samtools |
Samtools is a suite of programs for interacting with high-throughput sequencing data. |
| Bowtie 2 |
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. |
| WGCNA |
WGCNA: an R package for weighted correlation network analysis. |
| GENIE3 |
GEne Network Inference with Ensemble of trees. |
| Python |
Python is a programming language that lets you work quicklyand integrate systems more effectively. |
| Gephi |
Gephi is the leading visualization and exploration software for all kinds of graphs and networks. |
| Scikit-learn |
Machine Learning in Python. |
| Flask |
Flask is a lightweight and flexible Python web framework that is designed for building web applications quickly. |
| Bootstrap |
Powerful, extensible, and feature-packed frontend toolkit. |
| BLAST |
Basic Local Alignment Search Tool. |
| SequenceServer |
BLAST servers for custom and standard data. |
| Jbrowse2 |
The next-generation genome browser. |
